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Intron Name: Anas_platyrhynchos_platyrhynchos_1_137570285_137572267_F

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

137570285 - 137572267

Intron Length:

1983

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTATCTTTT

5'SS Class:

strong_minor

3'SS Sequence:

AAAAAAACCTCAG|A

3'SS Class:

strong_BPS

U2 Branch Point Sequence:

TGATCAT

U12 Branch Point Sequence:

TAGTCCTTGACT

Flanking Amino Acid:

SAEVLYQIANIYEMMEDPNQ

Intron Amino Acid Position:

562

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.5

0.37

1.2

73.5

Major BPS

0.57

1.2

41.2

Major PPT

49.7

-0

42.1

41.8

Minor 5ss

85.6

1.2

1.4

88.3

24.7

Minor BPS

82.1

1.09

1.1

88.28

36.8

Associated Gene:

Gene:

IFT88

Ensembl Gene ID:

ENSAPLG00000002720

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002830

137550154 - 137596961

46808