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Intron Name: Anas_platyrhynchos_platyrhynchos_1_137577490_137578943_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

137577490 - 137578943

Intron Length:

1454

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTGTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGGAT

U12 Branch Point Sequence:

TTTTGGATATGT

Flanking Amino Acid:

LMVASCYRRSGNYQKALEKY

Intron Amino Acid Position:

669

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.2

29.3

Major BPS

71.4

0.53

1.4

71.4

45.1

Major PPT

86.2

0.81

0.8

80.6

Minor 5ss

-0.8

2.8

56.6

41.9

Minor BPS

38.6

-0.7

2.8

68.26

48.3

Associated Gene:

Gene:

IFT88

Ensembl Gene ID:

ENSAPLG00000002720

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002830

137550154 - 137596961

46808