Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_137643798_137645378_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

137643798 - 137645378

Intron Length:

1581

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGAGG

5'SS Class:

strong_major

3'SS Sequence:

ACCTTTTCTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTTTTTTTACCT

Flanking Amino Acid:

SKEFIDFSDTDEVFRGHEPG

Intron Amino Acid Position:

925

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

66.1

45.1

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

81.9

0.72

0.8

76.1

31.9

Minor 5ss

37.8

-1.4

3.1

48.3

47.5

Minor BPS

74.2

0.84

1.5

90.89

33.1

Associated Gene:

Gene:

XPO4

Ensembl Gene ID:

ENSAPLG00000003203

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003342

137639106 - 137692846

53741