Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_137734414_137736078_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

137734414 - 137736078

Intron Length:

1665

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGATAAC

5'SS Class:

major

3'SS Sequence:

GTTTGTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTGGAT

U12 Branch Point Sequence:

TGGAGGACAACT

Flanking Amino Acid:

YIAPEVLLRKGYTQLCDWWS

Intron Amino Acid Position:

927

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

74.7

35.6

Major BPS

59.1

0.23

1.4

60.7

45.9

Major PPT

84.5

0.78

0.8

81.2

36.5

Minor 5ss

-1.8

3.1

44.4

43.7

Minor BPS

35.7

-1

2.5

54.76

46.3

Associated Gene:

Gene:

LATS2

Ensembl Gene ID:

ENSAPLG00000006486

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006728

137732857 - 137769216

36360