Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_137737396_137739986_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

137737396 - 137739986

Intron Length:

2591

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAATTCTC

5'SS Class:

major

3'SS Sequence:

TTCTCTTCTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTAAC

U12 Branch Point Sequence:

ACCTCACCAGCT

Flanking Amino Acid:

RLQLEQEMAKAGLCEAEQEQ

Intron Amino Acid Position:

672

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

71.8

38.2

Major BPS

65.7

0.39

1.2

67.4

36.7

Major PPT

83.8

0.76

0.7

77.4

31.4

Minor 5ss

40.6

-1.1

54.1

36.9

Minor BPS

40.1

-0.6

2.1

56.77

45.2

Associated Gene:

Gene:

LATS2

Ensembl Gene ID:

ENSAPLG00000006486

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006728

137732857 - 137769216

36360