Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_137868918_137871679_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

137868918 - 137871679

Intron Length:

2762

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

ATGTCTTTACTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATTAT

U12 Branch Point Sequence:

ATGTCTTTACTA

Flanking Amino Acid:

FTVANRPVKRAEFKRAVKVA

Intron Amino Acid Position:

304

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

78.8

35.5

Major BPS

75.9

0.64

66.1

40.5

Major PPT

69.7

0.44

63.6

42.2

Minor 5ss

34.9

-1.7

3.2

42.4

44.3

Minor BPS

0.37

1.6

68.96

38.3

Associated Gene:

Gene:

MICU2

Ensembl Gene ID:

ENSAPLG00000008715

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009098

137868341 - 137931055

62715