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Intron Name: Anas_platyrhynchos_platyrhynchos_1_137898050_137902869_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
137898050 - 137902869

Intron Length:
4820

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAACAAGG

5'SS Class:
major

3'SS Sequence:
TATTCCTTTTCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTTAA

U12 Branch Point Sequence:
TCATTTTTAACT

Flanking Amino Acid:
PTFFRELGDKGLISYAEYLF

Intron Amino Acid Position:
113

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.3
0.62
1.2
66.4
45.1

Major BPS
87.3
0.93
0.8
78
36.5

Major PPT
87.6
0.85
0.7
85.2
29.1

Minor 5ss
38.4
-1.3
2.9
49.5
46.3

Minor BPS
76.8
0.92
1.1
83.9
37.2

Associated Gene:

Gene:
MICU2

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

137868341 - 137931055
62715