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Intron Name: Anas_platyrhynchos_platyrhynchos_1_138571318_138571721_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

138571318 - 138571721

Intron Length:

404

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGGAT

5'SS Class:

strong_major

3'SS Sequence:

ATTTTCTACTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCTAC

U12 Branch Point Sequence:

TATTTTCTACTC

Flanking Amino Acid:

GCISQFFGQYRSFCQEHSPV

Intron Amino Acid Position:

174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

75.4

34.2

Major BPS

63.9

0.35

1.3

64.5

42.5

Major PPT

79.5

0.66

0.9

78.3

34.6

Minor 5ss

30.2

-2.3

3.7

45.9

49.3

Minor BPS

48.4

-0.1

1.9

63.21

36.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013344

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013888

138565985 - 138572821

6837