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Intron Name: Anas_platyrhynchos_platyrhynchos_1_138727192_138745639_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

138727192 - 138745639

Intron Length:

18448

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATTTATT

5'SS Class:

strong_major

3'SS Sequence:

TATTATTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

ATTCTATTATTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

85.4

30.8

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

86.5

0.82

0.8

81.1

35.8

Minor 5ss

47.8

-0.2

2.5

68.9

41.7

Minor BPS

50.5

0.09

1.8

72.72

38.2

Associated Gene:

Gene:

SGCG

Ensembl Gene ID:

ENSAPLG00000013021

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048385

138727100 - 138816136

89037