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Intron Name: Anas_platyrhynchos_platyrhynchos_1_138727192_138754953_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

138727192 - 138754953

Intron Length:

27762

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATTTATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTACACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

TTTTTCTTACAC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

85.4

30.8

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

0.76

0.8

80.4

30.5

Minor 5ss

47.8

-0.2

2.5

68.9

41.7

Minor BPS

66.9

0.51

1.7

79.08

36.2

Associated Gene:

Gene:

SGCG

Ensembl Gene ID:

ENSAPLG00000013021

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013582

138727100 - 138816408

89309