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Intron Name: Anas_platyrhynchos_platyrhynchos_1_138729103_138745639_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

138729103 - 138745639

Intron Length:

16537

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TATTATTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

ATTCTATTATTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

84.2

26.3

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

86.5

0.82

0.8

81.1

35.8

Minor 5ss

37.7

-1.4

2.7

46.1

36.1

Minor BPS

50.5

0.09

1.8

72.72

38.2

Associated Gene:

Gene:

SGCG

Ensembl Gene ID:

ENSAPLG00000013021

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017868

138728634 - 138816408

87775