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Intron Name: Anas_platyrhynchos_platyrhynchos_1_138770927_138774089_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

138770927 - 138774089

Intron Length:

3163

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGCAAT

5'SS Class:

strong_major

3'SS Sequence:

CTCCATACTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAA

U12 Branch Point Sequence:

TTCTCCATACTT

Flanking Amino Acid:

LYAKEIHSRVDSSLLLQSTH

Intron Amino Acid Position:

100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

79.7

35.3

Major BPS

0.82

0.8

83.9

25.3

Major PPT

73.8

0.54

0.9

34.8

Minor 5ss

41.2

-1

2.9

54.5

43.9

Minor BPS

59.5

0.38

1.9

80.51

41.8

Associated Gene:

Gene:

SGCG

Ensembl Gene ID:

ENSAPLG00000013021

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046735

138727720 - 138816136

88417

ENSAPLT00000023119

138728634 - 138816408

87775

ENSAPLT00000017868

138728634 - 138816408

87775

ENSAPLT00000013582

138727100 - 138816408

89309

ENSAPLT00000048385

138727100 - 138816136

89037