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Intron Name: Anas_platyrhynchos_platyrhynchos_1_138774178_138788979_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

138774178 - 138788979

Intron Length:

14802

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTCTA

5'SS Class:

strong_major

3'SS Sequence:

TTGTGCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATTAT

U12 Branch Point Sequence:

TATTCCATTATT

Flanking Amino Acid:

NGEVTGRLNVGPKMVEFHGQ

Intron Amino Acid Position:

129

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

38.6

Major BPS

76.9

0.67

66.3

40.4

Major PPT

82.9

0.74

0.9

77.1

37.1

Minor 5ss

37.4

-1.4

44.5

Minor BPS

61.2

0.43

1.9

82.22

38.7

Associated Gene:

Gene:

SGCG

Ensembl Gene ID:

ENSAPLG00000013021

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017868

138728634 - 138816408

87775

ENSAPLT00000013582

138727100 - 138816408

89309

ENSAPLT00000048385

138727100 - 138816136

89037

ENSAPLT00000046735

138727720 - 138816136

88417

ENSAPLT00000023119

138728634 - 138816408

87775