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Intron Name: Anas_platyrhynchos_platyrhynchos_1_138815518_138815962_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

138815518 - 138815962

Intron Length:

445

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TTCTCCCATGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAA

U12 Branch Point Sequence:

ATCTCAAAAAAA

Flanking Amino Acid:

DIKLQSSDGVLLLDAETVRL

Intron Amino Acid Position:

235

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.8

84.9

26.2

Major BPS

76.9

0.67

0.8

77.7

26.1

Major PPT

0.56

0.8

70.6

29.3

Minor 5ss

-1.8

2.8

39.2

40.5

Minor BPS

43.1

-0.5

2.1

57.36

41.4

Associated Gene:

Gene:

SGCG

Ensembl Gene ID:

ENSAPLG00000013021

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046735

138727720 - 138816136

88417

ENSAPLT00000023119

138728634 - 138816408

87775

ENSAPLT00000017868

138728634 - 138816408

87775

ENSAPLT00000013582

138727100 - 138816408

89309

ENSAPLT00000048385

138727100 - 138816136

89037