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Intron Name: Anas_platyrhynchos_platyrhynchos_1_138829476_138829655_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

138829476 - 138829655

Intron Length:

180

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGCCTC

5'SS Class:

strong_major

3'SS Sequence:

TGTTTGATCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

TTGTGTTTGATC

Flanking Amino Acid:

AIPKRHKALERQHPADRIFD

Intron Amino Acid Position:

2484

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

68.8

42.3

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

70.9

0.47

0.9

62.9

Minor 5ss

48.5

-0.1

2.8

67.7

43.5

Minor BPS

57.1

0.21

1.8

68.56

38.2

Associated Gene:

Gene:

SACS

Ensembl Gene ID:

ENSAPLG00000012626

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044394

138823439 - 138852155

28717