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Intron Name: Anas_platyrhynchos_platyrhynchos_1_138835000_138838408_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

138835000 - 138838408

Intron Length:

3409

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATGTCT

5'SS Class:

strong_major

3'SS Sequence:

GCTGTAATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTGCTGTAATT

Flanking Amino Acid:

AALKEAAKSRGRPCTQLQLL

Intron Amino Acid Position:

580

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

35.5

Major BPS

100

1.24

0.5

100

Major PPT

71.8

0.49

66.9

42.9

Minor 5ss

39.4

-1.2

3.3

57.2

Minor BPS

60.2

0.4

2.1

82.98

39.3

Associated Gene:

Gene:

SACS

Ensembl Gene ID:

ENSAPLG00000012626

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040057

138822928 - 138881290

58363

ENSAPLT00000021984

138822928 - 138849619

26692