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Intron Name: Anas_platyrhynchos_platyrhynchos_1_138846690_138849531_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

138846690 - 138849531

Intron Length:

2842

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATAAAA

U12 Branch Point Sequence:

TAGAATAAAACA

Flanking Amino Acid:

QLQSEGLKGGGRFGQTTPPL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

78.7

29.9

Major BPS

56.5

0.16

0.9

63.3

29.1

Major PPT

84.1

0.77

0.8

77.1

37.1

Minor 5ss

38.9

-1.3

2.8

48.3

47.4

Minor BPS

41.5

-0.6

1.9

51.16

Associated Gene:

Gene:

SACS

Ensembl Gene ID:

ENSAPLG00000012626

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013140

138823439 - 138852155

28717

ENSAPLT00000044394

138823439 - 138852155

28717

ENSAPLT00000040057

138822928 - 138881290

58363

ENSAPLT00000021984

138822928 - 138849619

26692

ENSAPLT00000017242

138823439 - 138863163

39725