Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_138851957_138852153_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

138851957 - 138852153

Intron Length:

197

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGTGGC

5'SS Class:

major

3'SS Sequence:

CGTGTCGCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAG

U12 Branch Point Sequence:

CTCTCCTCAGCC

Flanking Amino Acid:

MLSRVTVLHG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

68.7

36.5

Major BPS

58.4

0.21

1.5

67.6

40.6

Major PPT

65.1

0.34

57.7

38.5

Minor 5ss

-2.3

3.2

39.8

Minor BPS

55.6

0.15

1.9

66.44

45.1

Associated Gene:

Gene:

SACS

Ensembl Gene ID:

ENSAPLG00000012626

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013140

138823439 - 138852155

28717

ENSAPLT00000044394

138823439 - 138852155

28717