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Intron Name: Anas_platyrhynchos_platyrhynchos_1_139045014_139049901_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

139045014 - 139049901

Intron Length:

4888

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGTCT

5'SS Class:

strong_major

3'SS Sequence:

TCTATCTCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAA

U12 Branch Point Sequence:

CATTTTCTATCT

Flanking Amino Acid:

VCAAADMQLQVFYASLDQIY

Intron Amino Acid Position:

577

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

74.8

35.8

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

79.8

0.67

0.8

77.8

30.8

Minor 5ss

45.5

-0.5

3.1

65.3

46.1

Minor BPS

48.7

-0

1.9

68.93

42.3

Associated Gene:

Gene:

MIPEP

Ensembl Gene ID:

ENSAPLG00000012053

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047948

139027911 - 139115415

87505

ENSAPLT00000029180

139019565 - 139115415

95851