Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_139057078_139060270_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

139057078 - 139060270

Intron Length:

3193

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

ATTCTACCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

GTTCACTTATTC

Flanking Amino Acid:

LGRTRYQHVTGTRCSTDFAE

Intron Amino Acid Position:

515

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

81.1

32.8

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

74.9

0.56

0.8

71.9

33.7

Minor 5ss

35.6

-1.6

3.1

50.4

45.6

Minor BPS

53.1

0.08

1.8

65.93

39.4

Associated Gene:

Gene:

MIPEP

Ensembl Gene ID:

ENSAPLG00000012053

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047948

139027911 - 139115415

87505

ENSAPLT00000029180

139019565 - 139115415

95851

ENSAPLT00000012555

139019720 - 139115415

95696