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Intron Name: Anas_platyrhynchos_platyrhynchos_1_139143270_139143965_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

139143270 - 139143965

Intron Length:

696

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTATGTCGC

5'SS Class:

major

3'SS Sequence:

ATTTTTCCTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

TTTTTTCTATTT

Flanking Amino Acid:

SEIGSCFLQHQEGFAIYSEY

Intron Amino Acid Position:

1003

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

1.1

61.8

42.9

Major BPS

0.85

0.9

39.9

Major PPT

83.2

0.75

0.7

78.8

29.3

Minor 5ss

43.1

-0.8

2.8

57.3

40.6

Minor BPS

54.8

0.23

1.9

79.65

37.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001832

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012362

139132552 - 139174298

41747

ENSAPLT00000001825

139132552 - 139286447

153896