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Intron Name: Anas_platyrhynchos_platyrhynchos_1_139146899_139147940_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

139146899 - 139147940

Intron Length:

1042

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

GTTCTGGCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTTAC

U12 Branch Point Sequence:

TTTACTCTAGTT

Flanking Amino Acid:

EAWFPASFVRLRVNQEELPE

Intron Amino Acid Position:

881

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

77.5

32.9

Major BPS

68.8

0.47

1.2

63.4

Major PPT

72.8

0.51

65.5

Minor 5ss

30.1

-2.3

2.6

28.4

Minor BPS

52.3

0.15

1.9

77.4

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001832

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012362

139132552 - 139174298

41747

ENSAPLT00000001825

139132552 - 139286447

153896