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Intron Name: Anas_platyrhynchos_platyrhynchos_1_139158514_139160346_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

139158514 - 139160346

Intron Length:

1833

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGATTA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCCCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAC

U12 Branch Point Sequence:

TTTACTGAGACC

Flanking Amino Acid:

AEEIEGLLTQPATRPPVPAH

Intron Amino Acid Position:

727

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

80.6

27.4

Major BPS

71.4

0.53

1.1

63.4

Major PPT

0.76

0.8

78.1

30.7

Minor 5ss

43.2

-0.7

3.1

56.6

Minor BPS

-0.3

2.3

65.87

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001832

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012362

139132552 - 139174298

41747

ENSAPLT00000001825

139132552 - 139286447

153896