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Intron Name: Anas_platyrhynchos_platyrhynchos_1_139160710_139172411_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

139160710 - 139172411

Intron Length:

11702

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAAAG

5'SS Class:

strong_major

3'SS Sequence:

CACATTTAAAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCACAT

U12 Branch Point Sequence:

GCTTATTTGACT

Flanking Amino Acid:

APGAEEKKEEVVSDDHWKKS

Intron Amino Acid Position:

606

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.7

33.7

Major BPS

77.7

0.69

83.3

27.7

Major PPT

51.4

0.03

1.1

52.8

39.5

Minor 5ss

32.8

-2

2.9

39.4

46.1

Minor BPS

63.9

0.52

1.5

76.66

40.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001832

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012362

139132552 - 139174298

41747

ENSAPLT00000001825

139132552 - 139286447

153896