Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_139396765_139397529_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

139396765 - 139397529

Intron Length:

765

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTGAGTATT

5'SS Class:

major

3'SS Sequence:

TTCCGTATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTCAT

U12 Branch Point Sequence:

TTTTCCGTATTT

Flanking Amino Acid:

LEKDIKELEAKIKQKKWSTR

Intron Amino Acid Position:

537

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

80.3

34.1

Major BPS

78.6

0.71

79.6

32.9

Major PPT

80.3

0.68

0.9

77.3

35.6

Minor 5ss

39.1

-1.2

3.1

61.3

Minor BPS

61.7

0.45

2.2

87.57

38.6

Associated Gene:

Gene:

MTMR6

Ensembl Gene ID:

ENSAPLG00000011530

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012082

139396630 - 139418122

21493