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Intron Name: Anas_platyrhynchos_platyrhynchos_1_139417622_139417675_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

139417622 - 139417675

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGG|GCGGCGCCA

5'SS Class:

weak_major

3'SS Sequence:

TGGGGAGGCTGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GCGCCAT

U12 Branch Point Sequence:

ATTTTGGGGAGG

Flanking Amino Acid:

SAHAPPGGGSGGAQAGI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.3

0.03

1.3

45.2

36.6

Major BPS

42.8

-0.4

1.5

46.1

46.9

Major PPT

40.8

-0.5

1.7

35.2

44.8

Minor 5ss

-3.6

3.9

20.9

37.6

Minor BPS

33.6

-1.4

2.6

44.24

42.2

Associated Gene:

Gene:

NUP58

Ensembl Gene ID:

ENSAPLG00000010853

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011368

139417600 - 139452080

34481