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Intron Name: Anas_platyrhynchos_platyrhynchos_1_139423252_139424486_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

139423252 - 139424486

Intron Length:

1235

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGGACC

5'SS Class:

strong_major

3'SS Sequence:

GCTTTTCTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAAATAT

U12 Branch Point Sequence:

ATATCCAAAAAG

Flanking Amino Acid:

ATTIATALTLGTPATTSAAT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.3

0.95

0.8

79.6

33.9

Major BPS

50.9

0.02

1.1

47.4

35.7

Major PPT

81.1

0.7

0.8

73.5

37.1

Minor 5ss

33.5

-1.9

3.1

43.7

Minor BPS

47.2

-0.3

2.1

57.34

43.4

Associated Gene:

Gene:

NUP58

Ensembl Gene ID:

ENSAPLG00000010853

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011368

139417600 - 139452080

34481