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Intron Name: Anas_platyrhynchos_platyrhynchos_1_139424640_139425644_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

139424640 - 139425644

Intron Length:

1005

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

GTTTTCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGAAT

U12 Branch Point Sequence:

TCTGCATGAAGC

Flanking Amino Acid:

SSALTSTPAAGTTGFTLNLG

Intron Amino Acid Position:

130

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.9

1.01

0.7

23.7

Major BPS

74.6

0.61

1.4

34.5

Major PPT

86.8

0.83

0.7

81.5

30.6

Minor 5ss

32.8

-2

2.9

39.7

45.8

Minor BPS

46.5

-0.2

2.1

60.1

44.8

Associated Gene:

Gene:

NUP58

Ensembl Gene ID:

ENSAPLG00000010853

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011368

139417600 - 139452080

34481