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Intron Name: Anas_platyrhynchos_platyrhynchos_1_139426600_139429418_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

139426600 - 139429418

Intron Length:

2819

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

TATTTCTGACCT

Flanking Amino Acid:

IDFSSSSDKKSDKTGTRPED

Intron Amino Acid Position:

212

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

77.7

33.3

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

90.3

0.91

0.6

84.6

30.3

Minor 5ss

40.1

-1.1

2.9

49.5

41.1

Minor BPS

62.6

0.47

1.7

81.77

39.5

Associated Gene:

Gene:

NUP58

Ensembl Gene ID:

ENSAPLG00000010853

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011368

139417600 - 139452080

34481