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Intron Name: Anas_platyrhynchos_platyrhynchos_1_139429444_139429900_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

139429444 - 139429900

Intron Length:

457

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTGTT

5'SS Class:

major

3'SS Sequence:

TTGTCTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAACAT

U12 Branch Point Sequence:

ATGGTGTAAACA

Flanking Amino Acid:

KKSDKTGTRPEDSKALKDEN

Intron Amino Acid Position:

220

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

35.3

Major BPS

63.2

0.33

1.1

69.6

35.7

Major PPT

86.1

0.81

0.8

81.1

30.9

Minor 5ss

39.9

-1.1

3.4

54.7

43.6

Minor BPS

43.9

-0.4

2.3

56.3

43.5

Associated Gene:

Gene:

NUP58

Ensembl Gene ID:

ENSAPLG00000010853

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011368

139417600 - 139452080

34481