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Intron Name: Anas_platyrhynchos_platyrhynchos_1_139429967_139430685_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

139429967 - 139430685

Intron Length:

719

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTAGT

5'SS Class:

major

3'SS Sequence:

TTCCCTTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCCTAC

U12 Branch Point Sequence:

CTTTTCCTACTA

Flanking Amino Acid:

PVICQDVENLQKFVKEQKQV

Intron Amino Acid Position:

242

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

75.9

39.9

Major BPS

58.9

0.22

1.3

58.4

Major PPT

84.3

0.77

0.7

76.7

Minor 5ss

39.6

-1.2

2.9

57.1

41.1

Minor BPS

50.2

1.9

66.95

40.3

Associated Gene:

Gene:

NUP58

Ensembl Gene ID:

ENSAPLG00000010853

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011368

139417600 - 139452080

34481