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Intron Name: Anas_platyrhynchos_platyrhynchos_1_139438305_139445012_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

139438305 - 139445012

Intron Length:

6708

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCTGAGTG

5'SS Class:

major

3'SS Sequence:

TTTTTTATACCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATAC

Flanking Amino Acid:

TLTQQQQPATGPQPSLGVSF

Intron Amino Acid Position:

462

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.42

1.3

62.5

42.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

84.4

0.77

0.9

79.2

Minor 5ss

35.5

-1.6

3.3

47.1

48.3

Minor BPS

0.36

1.6

74.81

35.9

Associated Gene:

Gene:

NUP58

Ensembl Gene ID:

ENSAPLG00000010853

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011368

139417600 - 139452080

34481