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Intron Name: Anas_platyrhynchos_platyrhynchos_1_139447911_139451910_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

139447911 - 139451910

Intron Length:

4000

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGGTTTA

5'SS Class:

major

3'SS Sequence:

CCTCCCTCACAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TATGTTTTAAAA

Flanking Amino Acid:

TSKPSGSLSAGFGSSTTSGF

Intron Amino Acid Position:

527

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

1.2

76.2

35.8

Major BPS

90.4

0.7

90.2

19.3

Major PPT

58.5

0.19

32.3

Minor 5ss

38.7

-1.3

49.8

46.5

Minor BPS

61.3

0.35

1.5

69.01

37.3

Associated Gene:

Gene:

NUP58

Ensembl Gene ID:

ENSAPLG00000010853

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011368

139417600 - 139452080

34481