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Intron Name: Anas_platyrhynchos_platyrhynchos_1_139585363_139586440_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

139585363 - 139586440

Intron Length:

1078

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGGGGG

5'SS Class:

major

3'SS Sequence:

TGTTTTCCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTCAC

U12 Branch Point Sequence:

TTGGACTTCACT

Flanking Amino Acid:

TQNADGFNTRVFWGHCINAL

Intron Amino Acid Position:

961

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

1.1

58.7

46.2

Major BPS

68.7

0.46

71.3

Major PPT

83.3

0.75

0.8

81.6

30.5

Minor 5ss

28.2

-2.5

3.4

29.1

43.5

Minor BPS

54.1

0.21

2.1

76.54

45.9

Associated Gene:

Gene:

ATP8A2

Ensembl Gene ID:

ENSAPLG00000009563

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023946

139479401 - 139762617

283217

ENSAPLT00000018501

139479369 - 139796317

316949

ENSAPLT00000009982

139479401 - 139796317

316917

ENSAPLT00000047493

139479401 - 139796317

316917

ENSAPLT00000045064

139479401 - 139771736

292336