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Intron Name: Anas_platyrhynchos_platyrhynchos_1_139586564_139589261_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

139586564 - 139589261

Intron Length:

2698

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

GCTTGCTTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

CTACTTCTAATT

Flanking Amino Acid:

ERWCIGLYNVIFTALPPFTL

Intron Amino Acid Position:

920

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.8

80.6

31.8

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

79.6

0.67

0.9

72.7

37.5

Minor 5ss

35.5

-1.6

3.3

47.5

42.3

Minor BPS

49.5

0.04

1.6

66.16

Associated Gene:

Gene:

ATP8A2

Ensembl Gene ID:

ENSAPLG00000009563

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023946

139479401 - 139762617

283217

ENSAPLT00000018501

139479369 - 139796317

316949

ENSAPLT00000009982

139479401 - 139796317

316917

ENSAPLT00000047493

139479401 - 139796317

316917

ENSAPLT00000045064

139479401 - 139771736

292336