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Intron Name: Anas_platyrhynchos_platyrhynchos_1_139722233_139723412_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

139722233 - 139723412

Intron Length:

1180

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGCAGA

5'SS Class:

strong_major

3'SS Sequence:

CTTGTTTTTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTACAA

U12 Branch Point Sequence:

GTATTTACAATA

Flanking Amino Acid:

RTPHSVIIDALGKEKTFEIL

Intron Amino Acid Position:

556

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

69.3

43.2

Major BPS

73.5

0.59

81.3

29.9

Major PPT

84.6

0.78

0.7

80.6

31.4

Minor 5ss

39.2

-1.2

2.9

49.5

46.5

Minor BPS

46.8

-0.2

1.7

57.76

35.6

Associated Gene:

Gene:

ATP8A2

Ensembl Gene ID:

ENSAPLG00000009563

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009982

139479401 - 139796317

316917

ENSAPLT00000047493

139479401 - 139796317

316917

ENSAPLT00000045064

139479401 - 139771736

292336

ENSAPLT00000023946

139479401 - 139762617

283217

ENSAPLT00000018501

139479369 - 139796317

316949