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Intron Name: Anas_platyrhynchos_platyrhynchos_1_139740925_139741463_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

139740925 - 139741463

Intron Length:

539

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCAGCT

5'SS Class:

major

3'SS Sequence:

CCCTGCACCAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTCTTAC

U12 Branch Point Sequence:

TTTCCCTGCACC

Flanking Amino Acid:

FTGNLRLDGQRYPSWLCKLN

Intron Amino Acid Position:

261

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.3

0.43

1.2

63.6

41.2

Major BPS

63.8

0.34

1.2

57.4

41.4

Major PPT

53.4

0.08

51.8

30.2

Minor 5ss

37.5

-1.4

3.6

57.4

46.7

Minor BPS

60.8

0.32

1.9

77.11

38.5

Associated Gene:

Gene:

ATP8A2

Ensembl Gene ID:

ENSAPLG00000009563

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045064

139479401 - 139771736

292336

ENSAPLT00000018501

139479369 - 139796317

316949

ENSAPLT00000047493

139479401 - 139796317

316917