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Intron Name: Anas_platyrhynchos_platyrhynchos_1_139751177_139751751_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

139751177 - 139751751

Intron Length:

575

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGAGTTT

5'SS Class:

major

3'SS Sequence:

TCCCTCTTCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TCCCTCTTCACA

Flanking Amino Acid:

AFFLFIALLQQIPDVSPTGR

Intron Amino Acid Position:

109

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.56

1.1

72.8

39.1

Major BPS

0.92

0.9

86.2

29.1

Major PPT

80.1

0.68

0.7

74.9

27.3

Minor 5ss

40.6

-1

3.8

63.6

48.1

Minor BPS

54.6

0.14

1.8

63.68

43.1

Associated Gene:

Gene:

ATP8A2

Ensembl Gene ID:

ENSAPLG00000009563

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009982

139479401 - 139796317

316917

ENSAPLT00000047493

139479401 - 139796317

316917

ENSAPLT00000045064

139479401 - 139771736

292336

ENSAPLT00000023946

139479401 - 139762617

283217

ENSAPLT00000018501

139479369 - 139796317

316949