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Intron Name: Anas_platyrhynchos_platyrhynchos_1_139806086_139809549_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

139806086 - 139809549

Intron Length:

3464

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTGAGTCGA

5'SS Class:

major

3'SS Sequence:

TAATGCCCTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

TTCTGCTTACCT

Flanking Amino Acid:

GQSGNQTWRAVRGKTLMASF

Intron Amino Acid Position:

186

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.43

1.1

58.3

42.3

Major BPS

77.9

0.69

0.8

75.9

Major PPT

70.8

0.47

62.5

39.3

Minor 5ss

31.1

-2.2

2.9

42.1

44.5

Minor BPS

62.5

0.47

2.1

83.36

Associated Gene:

Gene:

RNF6

Ensembl Gene ID:

ENSAPLG00000009544

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042425

139801951 - 139814814

12864