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Intron Name: Anas_platyrhynchos_platyrhynchos_1_139811288_139813918_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

139811288 - 139813918

Intron Length:

2631

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATATGGA

5'SS Class:

major

3'SS Sequence:

CGATTTTGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

TGCAGTCTAACC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

67.4

37.9

Major BPS

0.75

78.6

Major PPT

73.7

0.53

68.8

41.7

Minor 5ss

37.5

-1.4

3.2

49.4

46.8

Minor BPS

45.3

-0.3

2.1

56.24

42.2

Associated Gene:

Gene:

RNF6

Ensembl Gene ID:

ENSAPLG00000009544

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009932

139807121 - 139814000

6880