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Intron Name: Anas_platyrhynchos_platyrhynchos_1_139811288_139814699_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

139811288 - 139814699

Intron Length:

3412

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTCGGTTGT

5'SS Class:

major

3'SS Sequence:

CGATTTTGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

TGCAGTCTAACC

Flanking Amino Acid:

GLERAARTATGQPGIPIMDR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.28

1.4

60.6

46.7

Major BPS

0.75

78.6

Major PPT

73.7

0.53

68.8

41.7

Minor 5ss

35.5

-1.6

3.1

45.3

Minor BPS

45.3

-0.3

2.1

56.24

42.2

Associated Gene:

Gene:

RNF6

Ensembl Gene ID:

ENSAPLG00000009544

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042425

139801951 - 139814814

12864

ENSAPLT00000030978

139807121 - 139814814

7694