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Intron Name: Anas_platyrhynchos_platyrhynchos_1_139818337_139835297_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

139818337 - 139835297

Intron Length:

16961

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTTTTTTAAAA

Flanking Amino Acid:

GHVYKAKRKDGKDDKDYALK

Intron Amino Acid Position:

181

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

68.4

38.7

Major BPS

90.4

0.7

90.2

19.3

Major PPT

87.4

0.84

0.7

25.5

Minor 5ss

26.1

-2.7

2.9

22.8

37.4

Minor BPS

76.9

0.84

1.2

83.98

29.3

Associated Gene:

Gene:

CDK8

Ensembl Gene ID:

ENSAPLG00000009252

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044659

139817044 - 139890253

73210

ENSAPLT00000029821

139817044 - 139871886

54843

ENSAPLT00000027959

139817044 - 139861869

44826