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Intron Name: Anas_platyrhynchos_platyrhynchos_1_139845870_139848533_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

139845870 - 139848533

Intron Length:

2664

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGGTGA

5'SS Class:

major

3'SS Sequence:

TTCCCCTTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTTTCTTTATTT

Flanking Amino Acid:

LFDYAEHDLWHIIKFHRASK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

66.6

41.6

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

85.2

0.79

0.7

79.4

26.1

Minor 5ss

35.7

-1.6

3.2

38.1

46.8

Minor BPS

76.2

0.9

1.4

91.47

32.2

Associated Gene:

Gene:

CDK8

Ensembl Gene ID:

ENSAPLG00000009252

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009658

139823605 - 139890253

66649

ENSAPLT00000044659

139817044 - 139890253

73210

ENSAPLT00000029821

139817044 - 139871886

54843

ENSAPLT00000027959

139817044 - 139861869

44826