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Intron Name: Anas_platyrhynchos_platyrhynchos_1_139869079_139871847_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

139869079 - 139871847

Intron Length:

2769

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTATGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TTGAATTTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TCTCTTTGAATT

Flanking Amino Acid:

EGPERGRVKIADMGFARLFN

Intron Amino Acid Position:

142

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

78.5

31.3

Major BPS

90.4

0.7

90.2

19.3

Major PPT

79.4

0.66

0.9

73.3

41.5

Minor 5ss

50.1

0.01

2.4

63.4

43.4

Minor BPS

59.2

0.37

1.4

73.39

38.1

Associated Gene:

Gene:

CDK8

Ensembl Gene ID:

ENSAPLG00000009252

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009658

139823605 - 139890253

66649

ENSAPLT00000044659

139817044 - 139890253

73210