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Intron Name: Anas_platyrhynchos_platyrhynchos_1_139874548_139876351_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

139874548 - 139876351

Intron Length:

1804

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACATATT

5'SS Class:

strong_major

3'SS Sequence:

CTGATTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

TATTGATAAATA

Flanking Amino Acid:

RIFNVMGFPADKDWEDIKKM

Intron Amino Acid Position:

234

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

84.4

33.4

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

81.8

0.72

0.9

76.4

37.5

Minor 5ss

39.9

-1.1

3.2

59.8

44.7

Minor BPS

47.4

-0.2

2.2

65.46

41.2

Associated Gene:

Gene:

CDK8

Ensembl Gene ID:

ENSAPLG00000009252

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044659

139817044 - 139890253

73210

ENSAPLT00000009658

139823605 - 139890253

66649