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Intron Name: Anas_platyrhynchos_platyrhynchos_1_139882736_139884127_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

139882736 - 139884127

Intron Length:

1392

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGA|GTAAGTGGT

5'SS Class:

major

3'SS Sequence:

TTTTGGGGGGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TGTTCTAATACA

Flanking Amino Acid:

YFLEDPLPTSDVFAGCQIPY

Intron Amino Acid Position:

314

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.1

69.9

41.1

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

61.5

0.26

1.2

57.5

47.4

Minor 5ss

35.7

-1.6

3.3

45.7

43.5

Minor BPS

46.3

-0.3

2.2

64.89

41.2

Associated Gene:

Gene:

CDK8

Ensembl Gene ID:

ENSAPLG00000009252

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044659

139817044 - 139890253

73210

ENSAPLT00000009658

139823605 - 139890253

66649