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Intron Name: Anas_platyrhynchos_platyrhynchos_1_139884207_139884325_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

139884207 - 139884325

Intron Length:

119

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TTAAACAATTGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTAAAC

U12 Branch Point Sequence:

TTGTGTTTAAAC

Flanking Amino Acid:

EEEPDDKGDKKNQQQQQGNN

Intron Amino Acid Position:

341

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

87.3

26.9

Major BPS

72.4

0.56

79.3

29.5

Major PPT

47.1

-0.1

1.7

52.8

45.5

Minor 5ss

40.1

-1.1

2.8

53.2

37.3

Minor BPS

59.6

0.28

1.9

71.11

40.5

Associated Gene:

Gene:

CDK8

Ensembl Gene ID:

ENSAPLG00000009252

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044659

139817044 - 139890253

73210

ENSAPLT00000009658

139823605 - 139890253

66649