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Intron Name: Anas_platyrhynchos_platyrhynchos_1_139884485_139888987_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

139884485 - 139888987

Intron Length:

4503

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTTGT

5'SS Class:

strong_major

3'SS Sequence:

CACCCCTCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATGAA

U12 Branch Point Sequence:

TCTGCTTTCACC

Flanking Amino Acid:

GGLIMTSDYQRSNPHAAYPN

Intron Amino Acid Position:

394

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.9

80.5

Major BPS

75.5

0.63

40.9

Major PPT

72.3

0.5

0.8

65.2

30.1

Minor 5ss

-0.2

2.5

67.3

43.8

Minor BPS

58.5

0.25

1.9

69.26

Associated Gene:

Gene:

CDK8

Ensembl Gene ID:

ENSAPLG00000009252

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009658

139823605 - 139890253

66649

ENSAPLT00000044659

139817044 - 139890253

73210