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Intron Name: Anas_platyrhynchos_platyrhynchos_1_14005493_14015494_F


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
14005493 - 14015494

Intron Length:
10002

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCG|GTAAGAGAT

5'SS Class:
strong_major

3'SS Sequence:
TTCTTTTAAACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TAATAAT

U12 Branch Point Sequence:
TTCTTTTAAACA

Flanking Amino Acid:
DILLFKNLDPEQMSQVLDAM

Intron Amino Acid Position:
183

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
83.1
0.78
0.9
75.5
34.4

Major BPS
80
0.75
1
78.6
31

Major PPT
79.5
0.66
0.9
77.4
34.7

Minor 5ss
32.6
-2
3.5
48.1
47.5

Minor BPS
64.1
0.44
1.6
73.92
38.7

Associated Gene:

Gene:
PRKAR2B

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

13941786 - 14022137
80352

13941786 - 14022137
80352