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Intron Name: Anas_platyrhynchos_platyrhynchos_1_140187533_140188118_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

140187533 - 140188118

Intron Length:

586

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTACG

5'SS Class:

strong_major

3'SS Sequence:

TGTCTCCCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTACAT

U12 Branch Point Sequence:

TGTCTCCCAACA

Flanking Amino Acid:

YMFSRPFRKHGVVPLATYMR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

77.1

37.8

Major BPS

67.6

0.44

1.2

Major PPT

72.1

0.5

0.9

66.8

34.3

Minor 5ss

36.2

-1.6

2.6

40.8

39.1

Minor BPS

49.6

-0

1.9

66.85

38.8

Associated Gene:

Gene:

RPL21

Ensembl Gene ID:

ENSAPLG00000005641

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038307

140186318 - 140191938

5621

ENSAPLT00000005851

140187454 - 140280747

93294